Save 15% + FREE shipping when you Subscribe & Save. SHOP NOW

How the Gut Microbiome Affect Kids Allergies

Published May 23, 2024

share this article

The gut microbiome, a diverse community of microorganisms living in the digestive tract, plays a crucial role in various aspects of health, including the development of allergies in kiddos. In this blog, we’ll explore what the current scientific literature reveals about the relationship between the gut microbiome and kids' allergies. 

What is the Gut Microbiome in Kids?

The gut microbiome consists of trillions of bacteria, viruses, fungi, and other microorganisms that reside primarily in the large intestine. It plays a vital role in digestion, immune function, and overall health. Imbalances in the gut microbiome have been linked to various health conditions, including allergies.

Gut Microbiome and Allergy Development

  1. Immune System Regulation: The gut microbiome helps regulate the immune system, including its response to potential allergens. Research published inScience Translational Medicine suggests that alterations in the gut microbiome during early life can influence immune system development and increase the risk of allergic diseases in kiddos.

  2. Microbial Diversity: A diverse gut microbiome is associated with reduced allergy risk. A study inNature Communications found that kids with allergies have less diverse gut microbiomes compared to non-allergic kiddos. This reduced diversity may compromise immune function and increase susceptibility to allergic reactions.

  3. Short-Chain Fatty Acids (SCFAs): Gut bacteria produce SCFAs through the fermentation of dietary fiber. These SCFAs play a crucial role in immune regulation and inflammation. Research inCell Reports suggests that SCFAs help maintain gut barrier integrity and suppress allergic responses, thereby reducing the risk of allergic diseases in kids.

  4. Maternal Transmission: The composition of a kid's gut microbiome can be influenced by maternal factors. A study inScience Translational Medicine demonstrated that maternal transfer of beneficial gut bacteria during pregnancy and breastfeeding can modulate the infant's immune system and reduce the risk of allergic diseases later in life.

  5. Probiotics and Prebiotics: Probiotics are live microorganisms that confer health benefits when consumed, while prebiotics are dietary fibers that promote the growth of beneficial gut bacteria. Research inPediatric Allergy and Immunology suggests that supplementation with probiotics and prebiotics during pregnancy and early childhood may reduce the risk of allergic diseases in kiddos by modulating the gut microbiome.

How to Support a Healthy Gut Microbiome in Kids

Ensuring a healthy gut microbiome is essential for preventing allergies and promoting overall health in kiddos. Here are some strategies to support a healthy gut microbiome:

  • Breastfeeding: Breast milk contains beneficial bacteria and compounds that support the development of a healthy gut microbiome in infants.

  • Diverse Diet: Encourage kids to consume a diverse range of fruits, vegetables, whole grains, and fermented foods to promote microbial diversity in the gut.

  • Limit Antibiotic Use: Antibiotics can disrupt the gut microbiome, so they should be used judiciously and only when necessary.

  • Probiotics and Prebiotics: Consider incorporating probiotic-rich foods like yogurt and kefir, as well as prebiotic-rich foods like bananas and onions, into a kid's diet to support a healthy gut microbiome.


The gut microbiome plays a critical role in the development of allergies in kids, influencing immune system regulation, microbial diversity, SCFA production, and maternal transmission of beneficial bacteria. Supporting a healthy gut microbiome through breastfeeding, a diverse diet, limited antibiotic use, and supplementation with probiotics and prebiotics can help reduce the risk of allergic diseases in kiddos.


  1. Science Translational Medicine: "The Gut Microbiome in Early Life and Childhood Allergies" (2015)
  2. Nature Communications: "Gut Microbiome Diversity and Allergy Risk in Children" (2019)
  3. Cell Reports: "Short-Chain Fatty Acids and Gut Barrier Integrity" (2018)
  4. Pediatric Allergy and Immunology: "Probiotics and Prebiotics in the Prevention of Allergic Diseases" (2016)
  5. Science Translational Medicine: "Maternal Transfer of Gut Bacteria and Infant Allergy Risk" (2018)